3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
GGAUGCAAAC
Length
10 nucleotides
Bulged bases
6BZ8|1|YA|U|747, 6BZ8|1|YA|A|751
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ8_174 not in the Motif Atlas
Homologous match to HL_7RQB_023
Geometric discrepancy: 0.1113
The information below is about HL_7RQB_023
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_39334.6
Basepair signature
cWW-cWS-tSW-F-F
Number of instances in this motif group
6

Unit IDs

6BZ8|1|YA|G|744
6BZ8|1|YA|G|745
6BZ8|1|YA|A|746
6BZ8|1|YA|U|747
6BZ8|1|YA|G|748
6BZ8|1|YA|C|749
6BZ8|1|YA|A|750
6BZ8|1|YA|A|751
6BZ8|1|YA|A|752
6BZ8|1|YA|C|753

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain Y7
50S ribosomal protein L34
Chain YE
50S ribosomal protein L3
Chain YW
50S ribosomal protein L22

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.173 s