HL_6CB1_027

3D structure

PDB id

6CB1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast nucleolar pre-60S ribosomal subunit (state 3)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GUUUAUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CB1_027 not in the Motif Atlas

Homologous match to HL_5TBW_038

Geometric discrepancy: 0.12

The information below is about HL_5TBW_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75033.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

6CB1|1|1|G|1719
6CB1|1|1|U|1720
6CB1|1|1|U|1721
6CB1|1|1|U|1722
6CB1|1|1|A|1723
6CB1|1|1|U|1724
6CB1|1|1|C|1725

Current chains

Chain 1

35S pre-ribosomal RNA miscRNA

Nearby chains