HL_6DZI_019
3D structure
- PDB id
- 6DZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- UUUUGAAGAA
- Length
- 10 nucleotides
- Bulged bases
- 6DZI|1|A|A|666
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6DZI_019 not in the Motif Atlas
- Geometric match to HL_7RQB_018
- Geometric discrepancy: 0.1728
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
6DZI|1|A|U|658
6DZI|1|A|U|659
6DZI|1|A|U|660
6DZI|1|A|U|661
6DZI|1|A|G|662
6DZI|1|A|A|663
6DZI|1|A|A|664
6DZI|1|A|G|665
6DZI|1|A|A|666
6DZI|1|A|A|667
Current chains
- Chain A
- 23 S rRNA (3119-MER)
Nearby chains
- Chain 3
- Uncharacterized protein
- Chain D
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L15
- Chain R
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L21
- Chain b
- 50S ribosomal protein L32
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