HL_6ELZ_045
3D structure
- PDB id
- 6ELZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGUUCAUAG
- Length
- 9 nucleotides
- Bulged bases
- 6ELZ|1|1|U|2846
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ELZ_045 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.1542
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6ELZ|1|1|C|2840
6ELZ|1|1|G|2841
6ELZ|1|1|U|2842
6ELZ|1|1|U|2843
6ELZ|1|1|C|2844
6ELZ|1|1|A|2845
6ELZ|1|1|U|2846
6ELZ|1|1|A|2847
6ELZ|1|1|G|2848
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain S
- 60S ribosomal protein L20-A
- Chain s
- Nuclear GTP-binding protein NUG1
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