HL_6ENJ_123

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6ENJ|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENJ_123 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1678

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6ENJ|1|A|A|382
6ENJ|1|A|C|383
6ENJ|1|A|A|384
6ENJ|1|A|C|385
6ENJ|1|A|G|386
6ENJ|1|A|U|387
6ENJ|1|A|G|388
6ENJ|1|A|G|389
6ENJ|1|A|U|390
6ENJ|1|A|A|391
6ENJ|1|A|U|392

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28