3D structure

PDB id
6ENU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
6ENU|1|a|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ENU_086 not in the Motif Atlas
Homologous match to HL_5J7L_017
Geometric discrepancy: 0.1308
The information below is about HL_5J7L_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

6ENU|1|a|G|786
6ENU|1|a|A|787
6ENU|1|a|U|788
6ENU|1|a|U|789
6ENU|1|a|A|790
6ENU|1|a|G|791
6ENU|1|a|A|792
6ENU|1|a|U|793
6ENU|1|a|A|794
6ENU|1|a|C|795
6ENU|1|a|C|796

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain A
Large subunit ribosomal RNA; LSU rRNA
Chain k
30S ribosomal protein S11
Chain u
30S ribosomal protein S21
Chain v
mRNA
Chain w
Elongation factor P
Chain x
Transfer RNA; tRNA

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