HL_6ERI_023
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGUUGAAGAA
- Length
- 10 nucleotides
- Bulged bases
- 6ERI|1|AA|U|758, 6ERI|1|AA|G|762, 6ERI|1|AA|A|763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ERI_023 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.1322
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
6ERI|1|AA|U|755
6ERI|1|AA|G|756
6ERI|1|AA|U|757
6ERI|1|AA|U|758
6ERI|1|AA|G|759
6ERI|1|AA|A|760
6ERI|1|AA|A|761
6ERI|1|AA|G|762
6ERI|1|AA|A|763
6ERI|1|AA|A|764
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AD
- 50S ribosomal protein L3, chloroplastic
- Chain AS
- 50S ribosomal protein L22, chloroplastic
- Chain Aa
- 50S ribosomal protein L32, chloroplastic
- Chain Ac
- 50S ribosomal protein L34, chloroplastic
Coloring options: