HL_6ERI_100

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ERI_100 not in the Motif Atlas

Homologous match to HL_5J7L_027

Geometric discrepancy: 0.0955

The information below is about HL_5J7L_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6ERI|1|BA|C|1214
6ERI|1|BA|G|1215
6ERI|1|BA|C|1216
6ERI|1|BA|G|1217
6ERI|1|BA|A|1218
6ERI|1|BA|G|1219

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BM

30S ribosomal protein S13, chloroplastic

Chain BS

30S ribosomal protein S19, chloroplastic

Chain BW

30S ribosomal protein S31, chloroplastic