HL_6ERI_102
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGUCAGCCAUAC
- Length
- 12 nucleotides
- Bulged bases
- 6ERI|1|BA|U|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ERI_102 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.1152
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6ERI|1|BA|G|1305
6ERI|1|BA|G|1306
6ERI|1|BA|U|1307
6ERI|1|BA|C|1308
6ERI|1|BA|A|1309
6ERI|1|BA|G|1310
6ERI|1|BA|C|1311
6ERI|1|BA|C|1312
6ERI|1|BA|A|1313
6ERI|1|BA|U|1314
6ERI|1|BA|A|1315
6ERI|1|BA|C|1316
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BI
- 30S ribosomal protein S9, chloroplastic
- Chain BJ
- 30S ribosomal protein S10 alpha, chloroplastic
- Chain BM
- 30S ribosomal protein S13, chloroplastic
- Chain BN
- 30S ribosomal protein S14, chloroplastic
- Chain BW
- 30S ribosomal protein S31, chloroplastic
Coloring options: