HL_6ERI_107

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGGAAU

Length

6 nucleotides

Bulged bases

6ERI|1|BA|G|186, 6ERI|1|BA|A|188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ERI_107 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.2701

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6ERI|1|BA|A|184
6ERI|1|BA|G|185
6ERI|1|BA|G|186
6ERI|1|BA|A|187
6ERI|1|BA|A|188
6ERI|1|BA|U|189

Current chains

Chain BA

16S ribosomal RNA

Nearby chains