HL_6FRK_057

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

6FRK|1|5|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6FRK_057 not in the Motif Atlas

Homologous match to HL_5TBW_049

Geometric discrepancy: 0.1784

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6FRK|1|5|G|3757
6FRK|1|5|U|3758
6FRK|1|5|A|3759
6FRK|1|5|A|3760
6FRK|1|5|C|3761
6FRK|1|5|U|3762
6FRK|1|5|A|3763
6FRK|1|5|U|3764
6FRK|1|5|G|3765
6FRK|1|5|A|3766
6FRK|1|5|C|3767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 2

Transfer RNA; tRNA