HL_6FTG_007
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- GUGUGAGGC
- Length
- 9 nucleotides
- Bulged bases
- 6FTG|1|u|G|232, 6FTG|1|u|U|233, 6FTG|1|u|G|234
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FTG_007 not in the Motif Atlas
- Homologous match to HL_5TBW_007
- Geometric discrepancy: 0.1577
- The information below is about HL_5TBW_007
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_08002.12
- Basepair signature
- cWW-cWW-F-tWH
- Number of instances in this motif group
- 16
Unit IDs
6FTG|1|u|G|230
6FTG|1|u|U|231
6FTG|1|u|G|232
6FTG|1|u|U|233
6FTG|1|u|G|234
6FTG|1|u|A|235
6FTG|1|u|G|236
6FTG|1|u|G|237
6FTG|1|u|C|238
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain Y
- Ribosomal protein L26
- Chain w
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: