HL_6FTJ_008
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 6FTJ|1|u|G|294, 6FTJ|1|u|A|295, 6FTJ|1|u|A|296
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FTJ_008 not in the Motif Atlas
- Homologous match to HL_5TBW_008
- Geometric discrepancy: 0.1285
- The information below is about HL_5TBW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
6FTJ|1|u|C|289
6FTJ|1|u|U|290
6FTJ|1|u|U|291
6FTJ|1|u|G|292
6FTJ|1|u|G|293
6FTJ|1|u|G|294
6FTJ|1|u|A|295
6FTJ|1|u|A|296
6FTJ|1|u|U|297
6FTJ|1|u|G|298
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain L
- eL13
- Chain N
- Ribosomal protein L15
- Chain Q
- uL14
- Chain a
- uL15
- Chain o
- eL42
Coloring options: