HL_6FXC_090
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 6FXC|1|Aa|G|980
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FXC_090 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.2603
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6FXC|1|Aa|G|972
6FXC|1|Aa|A|973
6FXC|1|Aa|A|974
6FXC|1|Aa|G|975
6FXC|1|Aa|C|976
6FXC|1|Aa|A|977
6FXC|1|Aa|A|978
6FXC|1|Aa|C|979
6FXC|1|Aa|G|980
6FXC|1|Aa|C|981
Current chains
- Chain Aa
- 16S ribosomal RNA
Nearby chains
- Chain Ai
- 30S ribosomal protein S9
- Chain Aj
- 30S ribosomal protein S10
- Chain An
- 30S ribosomal protein S14 type Z
- Chain Av
- Ribosome hibernation promotion factor
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