HL_6FXC_100

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

CUUUUAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6FXC_100 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.3665

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

6FXC|1|Aa|C|1459
6FXC|1|Aa|U|1460
6FXC|1|Aa|U|1461
6FXC|1|Aa|U|1462
6FXC|1|Aa|U|1463
6FXC|1|Aa|A|1464
6FXC|1|Aa|G|1465

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains