HL_6GAW_034
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUGGCAAAA
- Length
- 10 nucleotides
- Bulged bases
- 6GAW|1|BA|G|294, 6GAW|1|BA|A|298, 6GAW|1|BA|A|299
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GAW_034 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.0958
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
6GAW|1|BA|U|291
6GAW|1|BA|G|292
6GAW|1|BA|U|293
6GAW|1|BA|G|294
6GAW|1|BA|G|295
6GAW|1|BA|C|296
6GAW|1|BA|A|297
6GAW|1|BA|A|298
6GAW|1|BA|A|299
6GAW|1|BA|A|300
Current chains
- Chain BA
- 16S ribosomal RNA, mitochondrial
Nearby chains
- Chain B7
- Mitochondrial ribosomal protein L34
- Chain BE
- ICT1
- Chain BW
- uL22m
- Chain Bi
- mL45
Coloring options: