HL_6GAW_047
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6GAW|1|BA|A|832, 6GAW|1|BA|C|833, 6GAW|1|BA|C|834, 6GAW|1|BA|A|838
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GAW_047 not in the Motif Atlas
- Homologous match to HL_7RQB_045
- Geometric discrepancy: 0.069
- The information below is about HL_7RQB_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.5
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
6GAW|1|BA|U|829
6GAW|1|BA|U|830
6GAW|1|BA|U|831
6GAW|1|BA|A|832
6GAW|1|BA|C|833
6GAW|1|BA|C|834
6GAW|1|BA|A|835
6GAW|1|BA|A|836
6GAW|1|BA|A|837
6GAW|1|BA|A|838
6GAW|1|BA|A|839
Current chains
- Chain BA
- 16S ribosomal RNA, mitochondrial
Nearby chains
- Chain B7
- Mitochondrial ribosomal protein L34
- Chain BD
- 39S ribosomal protein L2, mitochondrial
- Chain BW
- uL22m
- Chain Bi
- mL45
Coloring options: