HL_6GC0_075
3D structure
- PDB id
- 6GC0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGUAAUCCG
- Length
- 9 nucleotides
- Bulged bases
- 6GC0|1|A|A|2211, 6GC0|1|A|U|2213
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GC0_075 not in the Motif Atlas
- Homologous match to HL_4WF9_069
- Geometric discrepancy: 0.5841
- The information below is about HL_4WF9_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_83003.1
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6GC0|1|A|C|2208
6GC0|1|A|G|2209
6GC0|1|A|U|2210
6GC0|1|A|A|2211
6GC0|1|A|A|2212
6GC0|1|A|U|2213
6GC0|1|A|C|2214
6GC0|1|A|C|2215
6GC0|1|A|G|2216
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain X
- 50S ribosomal protein L28
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