HL_6GSL_200

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

6GSL|1|1H|G|2751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GSL_200 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.0856

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

6GSL|1|1H|C|2745
6GSL|1|1H|U|2746
6GSL|1|1H|G|2747
6GSL|1|1H|A|2748
6GSL|1|1H|A|2749
6GSL|1|1H|A|2750
6GSL|1|1H|G|2751
6GSL|1|1H|C|2752
6GSL|1|1H|A|2753
6GSL|1|1H|U|2754
6GSL|1|1H|C|2755
6GSL|1|1H|U|2756
6GSL|1|1H|A|2757
6GSL|1|1H|A|2758
6GSL|1|1H|G|2759

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6

Chain 58

50S ribosomal protein L13