HL_6GWT_096

3D structure

PDB id

6GWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUCCGGCC

Length

9 nucleotides

Bulged bases

6GWT|1|a|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GWT_096 not in the Motif Atlas

Geometric match to HL_9E6Q_025

Geometric discrepancy: 0.3611

The information below is about HL_9E6Q_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92598.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

6GWT|1|a|G|1133
6GWT|1|a|G|1134
6GWT|1|a|U|1135
6GWT|1|a|C|1136
6GWT|1|a|C|1137
6GWT|1|a|G|1138
6GWT|1|a|G|1139
6GWT|1|a|C|1140
6GWT|1|a|C|1141

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9