HL_6GWT_113

3D structure

PDB id

6GWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6GWT|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GWT_113 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.2099

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6GWT|1|A|A|382
6GWT|1|A|C|383
6GWT|1|A|A|384
6GWT|1|A|C|385
6GWT|1|A|G|386
6GWT|1|A|U|387
6GWT|1|A|G|388
6GWT|1|A|G|389
6GWT|1|A|U|390
6GWT|1|A|A|391
6GWT|1|A|U|392

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28