HL_6GXM_024

3D structure

PDB id

6GXM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUACU

Length

6 nucleotides

Bulged bases

6GXM|1|A|A|892

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GXM_024 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3593

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

6GXM|1|A|G|882
6GXM|1|A|G|883
6GXM|1|A|U|884
6GXM|1|A|A|892
6GXM|1|A|C|893
6GXM|1|A|U|894

Current chains

Chain A

23S ribosomal RNA

Nearby chains