HL_6GXM_046
3D structure
- PDB id
- 6GXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 6GXM|1|A|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GXM_046 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.3356
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6GXM|1|A|G|1910
6GXM|1|A|U|1911
6GXM|1|A|A|1912
6GXM|1|A|A|1913
6GXM|1|A|C|1914
6GXM|1|A|U|1915
6GXM|1|A|A|1916
6GXM|1|A|U|1917
6GXM|1|A|A|1918
6GXM|1|A|A|1919
6GXM|1|A|C|1920
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- Peptide chain release factor RF1
Coloring options: