HL_6GXN_052
3D structure
- PDB id
- 6GXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 6GXN|1|A|A|2268, 6GXN|1|A|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GXN_052 not in the Motif Atlas
- Homologous match to HL_5J7L_187
- Geometric discrepancy: 0.1607
- The information below is about HL_5J7L_187
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6GXN|1|A|C|2264
6GXN|1|A|U|2265
6GXN|1|A|A|2266
6GXN|1|A|A|2267
6GXN|1|A|A|2268
6GXN|1|A|G|2269
6GXN|1|A|A|2270
6GXN|1|A|G|2271
6GXN|1|A|U|2272
6GXN|1|A|A|2273
6GXN|1|A|A|2274
6GXN|1|A|C|2275
6GXN|1|A|G|2276
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L27
- Chain x
- Transfer RNA; tRNA
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