HL_6GZ3_044
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 6GZ3|1|A2|C|2773, 6GZ3|1|A2|G|2775, 6GZ3|1|A2|A|2777
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZ3_044 not in the Motif Atlas
- Homologous match to HL_8C3A_041
- Geometric discrepancy: 0.1788
- The information below is about HL_8C3A_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56817.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6GZ3|1|A2|C|2771
6GZ3|1|A2|G|2772
6GZ3|1|A2|C|2773
6GZ3|1|A2|A|2774
6GZ3|1|A2|G|2775
6GZ3|1|A2|C|2776
6GZ3|1|A2|A|2777
6GZ3|1|A2|G|2778
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AC
- ribosomal protein uL4
- Chain AP
- ribosomal protein uL22
- Chain Aj
- Ribosomal protein L37
- Chain Al
- ribosomal protein eL39
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