HL_6GZ3_106
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 6GZ3|1|B1|A|1253
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZ3_106 not in the Motif Atlas
- Homologous match to HL_4V88_212
- Geometric discrepancy: 0.1317
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6GZ3|1|B1|G|1245
6GZ3|1|B1|A|1246
6GZ3|1|B1|C|1247
6GZ3|1|B1|U|1248
6GZ3|1|B1|C|1249
6GZ3|1|B1|A|1250
6GZ3|1|B1|A|1251
6GZ3|1|B1|C|1252
6GZ3|1|B1|A|1253
6GZ3|1|B1|C|1254
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BQ
- ribosomal protein uS9
- Chain BS
- ribosomal protein uS13
- Chain BU
- ribosomal protein uS10
- Chain Bd
- ribosomal protein uS14
- Chain Bf
- Ribosomal protein S27a
- Chain Bv
- Transfer RNA; tRNA
- Chain Bw
- Transfer RNA; tRNA
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