HL_6GZ4_095

3D structure

PDB id

6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCCC

Length

4 nucleotides

Bulged bases

6GZ4|1|B1|C|790

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZ4_095 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3433

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6GZ4|1|B1|G|751
6GZ4|1|B1|C|790
6GZ4|1|B1|C|791
6GZ4|1|B1|C|792

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BG

ribosomal protein eS6