HL_6GZZ_022
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GGAUGCAAAC
- Length
- 10 nucleotides
- Bulged bases
- 6GZZ|1|A1|U|796, 6GZZ|1|A1|A|800, 6GZZ|1|A1|A|801
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZZ_022 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.2855
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88205.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
6GZZ|1|A1|G|793
6GZZ|1|A1|G|794
6GZZ|1|A1|A|795
6GZZ|1|A1|U|796
6GZZ|1|A1|G|797
6GZZ|1|A1|C|798
6GZZ|1|A1|A|799
6GZZ|1|A1|A|800
6GZZ|1|A1|A|801
6GZZ|1|A1|C|802
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain D1
- 50S ribosomal protein L3
- Chain R1
- 50S ribosomal protein L22
- Chain a1
- 50S ribosomal protein L32
- Chain c1
- 50S ribosomal protein L34
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