HL_6GZZ_149
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CGAAGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 6GZZ|1|A3|G|948
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZZ_149 not in the Motif Atlas
- Geometric match to HL_6UFM_001
- Geometric discrepancy: 0.3223
- The information below is about HL_6UFM_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_04642.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6GZZ|1|A3|C|939
6GZZ|1|A3|G|940
6GZZ|1|A3|A|941
6GZZ|1|A3|A|942
6GZZ|1|A3|G|943
6GZZ|1|A3|C|944
6GZZ|1|A3|A|945
6GZZ|1|A3|A|946
6GZZ|1|A3|C|947
6GZZ|1|A3|G|948
6GZZ|1|A3|C|949
6GZZ|1|A3|G|950
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain I3
- 30S ribosomal protein S9
- Chain J3
- 30S ribosomal protein S10
- Chain M3
- 30S ribosomal protein S13
- Chain N3
- 30S ribosomal protein S14 type Z
- Chain V3
- Ribosome hibernation promoting factor
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