HL_6GZZ_155
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CUGCAACCCG
- Length
- 10 nucleotides
- Bulged bases
- 6GZZ|1|A3|C|1301
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZZ_155 not in the Motif Atlas
- Homologous match to HL_5J7L_028
- Geometric discrepancy: 0.4759
- The information below is about HL_5J7L_028
- Detailed Annotation
- T-loop with 3 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_02887.3
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6GZZ|1|A3|C|1295
6GZZ|1|A3|U|1296
6GZZ|1|A3|G|1297
6GZZ|1|A3|C|1298
6GZZ|1|A3|A|1299
6GZZ|1|A3|A|1300
6GZZ|1|A3|C|1301
6GZZ|1|A3|C|1302
6GZZ|1|A3|C|1303
6GZZ|1|A3|G|1304
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain M3
- 30S ribosomal protein S13
- Chain N3
- 30S ribosomal protein S14 type Z
- Chain S3
- 30S ribosomal protein S19
- Chain Z1
- 50S ribosomal protein L31
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