HL_6H58_086

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6H58_086 not in the Motif Atlas

Geometric match to HL_5J7L_152

Geometric discrepancy: 0.0846

The information below is about HL_5J7L_152

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

6H58|1|AA|G|629
6H58|1|AA|G|630
6H58|1|AA|A|631
6H58|1|AA|A|632
6H58|1|AA|A|633
6H58|1|AA|C|634

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain 33

50S ribosomal protein L35

Chain LL

50S ribosomal protein L15