HL_6H58_105

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6H58|1|AA|A|1535

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6H58_105 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3452

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6H58|1|AA|C|1533
6H58|1|AA|U|1534
6H58|1|AA|A|1535
6H58|1|AA|C|1536
6H58|1|AA|G|1537
6H58|1|AA|G|1538

Current chains

Chain AA

23S ribosomal RNA

Nearby chains