3D structure

PDB id
6H58 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
7.9 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
6H58|1|AA|A|1535
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6H58_105 not in the Motif Atlas
Geometric match to HL_2Y8W_001
Geometric discrepancy: 0.3452
The information below is about HL_2Y8W_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_81100.2
Basepair signature
cWW
Number of instances in this motif group
3

Unit IDs

6H58|1|AA|C|1533
6H58|1|AA|U|1534
6H58|1|AA|A|1535
6H58|1|AA|C|1536
6H58|1|AA|G|1537
6H58|1|AA|G|1538

Current chains

Chain AA
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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