HL_6H58_126

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

6H58|1|AA|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6H58_126 not in the Motif Atlas

Geometric match to HL_5J7L_192

Geometric discrepancy: 0.0796

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6H58|1|AA|U|2404
6H58|1|AA|G|2405
6H58|1|AA|A|2406
6H58|1|AA|A|2407
6H58|1|AA|U|2408
6H58|1|AA|G|2409
6H58|1|AA|G|2410
6H58|1|AA|A|2411
6H58|1|AA|A|2412
6H58|1|AA|G|2413

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain LL

50S ribosomal protein L15