3D structure

PDB id
6H58 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
7.9 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6H58_181 not in the Motif Atlas
Homologous match to HL_5J7L_010
Geometric discrepancy: 0.1238
The information below is about HL_5J7L_010
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

6H58|1|aa|C|379
6H58|1|aa|G|380
6H58|1|aa|C|381
6H58|1|aa|A|382
6H58|1|aa|A|383
6H58|1|aa|G|384

Current chains

Chain aa
16S ribosomal RNA

Nearby chains

Chain pp
30S ribosomal protein S16

Coloring options:


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