HL_6HA1_012
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUAACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 6HA1|1|A|A|373, 6HA1|1|A|A|374, 6HA1|1|A|C|375
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HA1_012 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.1343
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
6HA1|1|A|G|371
6HA1|1|A|U|372
6HA1|1|A|A|373
6HA1|1|A|A|374
6HA1|1|A|C|375
6HA1|1|A|A|376
6HA1|1|A|G|377
6HA1|1|A|C|378
6HA1|1|A|C|379
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain U
- 50S ribosomal protein L24
Coloring options: