HL_6HRM_014
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GCUCAAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HRM_014 not in the Motif Atlas
- Homologous match to HL_5J7L_014
- Geometric discrepancy: 0.138
- The information below is about HL_5J7L_014
- Detailed Annotation
- GNRA-like with tWH
- Broad Annotation
- GNRA
- Motif group
- HL_10453.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6HRM|1|1|G|617
6HRM|1|1|C|618
6HRM|1|1|U|619
6HRM|1|1|C|620
6HRM|1|1|A|621
6HRM|1|1|A|622
6HRM|1|1|C|623
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S4
- Chain u
- 30S ribosomal protein S16
Coloring options: