HL_6HRM_021
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GAU(2MG)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 6HRM|1|1|A|968, 6HRM|1|1|G|971
- QA status
- Modified nucleotides: 2MG, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HRM_021 not in the Motif Atlas
- Homologous match to HL_5J7L_021
- Geometric discrepancy: 0.2079
- The information below is about HL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6HRM|1|1|G|963
6HRM|1|1|A|964
6HRM|1|1|U|965
6HRM|1|1|2MG|966
6HRM|1|1|5MC|967
6HRM|1|1|A|968
6HRM|1|1|A|969
6HRM|1|1|C|970
6HRM|1|1|G|971
6HRM|1|1|C|972
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain n
- 30S ribosomal protein S9
- Chain o
- 30S ribosomal protein S10
- Chain r
- 30S ribosomal protein S13
Coloring options: