HL_6HRM_108
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- (PSU)GCUAACG
- Length
- 8 nucleotides
- Bulged bases
- 6HRM|1|1|U|2464, 6HRM|1|1|C|2467
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HRM_108 not in the Motif Atlas
- Geometric match to HL_5J7L_211
- Geometric discrepancy: 0.0789
- The information below is about HL_5J7L_211
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
6HRM|1|1|PSU|2461
6HRM|1|1|G|2462
6HRM|1|1|C|2463
6HRM|1|1|U|2464
6HRM|1|1|A|2465
6HRM|1|1|A|2466
6HRM|1|1|C|2467
6HRM|1|1|G|2468
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: