HL_6HTQ_009

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

6HTQ|1|A|U|285, 6HTQ|1|A|U|286

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_009 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3693

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6HTQ|1|A|G|283
6HTQ|1|A|C|284
6HTQ|1|A|U|285
6HTQ|1|A|U|286
6HTQ|1|A|G|287
6HTQ|1|A|C|288

Current chains

Chain A

23S ribosomal RNA

Nearby chains