HL_6HTQ_029

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GCGUAAUAGC

Length

10 nucleotides

Bulged bases

6HTQ|1|A|A|1141

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_029 not in the Motif Atlas

Homologous match to HL_5J7L_212

Geometric discrepancy: 0.4563

The information below is about HL_5J7L_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6HTQ|1|A|G|1137
6HTQ|1|A|C|1138
6HTQ|1|A|G|1139
6HTQ|1|A|U|1140
6HTQ|1|A|A|1141
6HTQ|1|A|A|1142
6HTQ|1|A|U|1143
6HTQ|1|A|A|1144
6HTQ|1|A|G|1145
6HTQ|1|A|C|1146

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L36

Chain G

50S ribosomal protein L6