HL_6HTQ_113

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GGGAAACC

Length

8 nucleotides

Bulged bases

6HTQ|1|A|A|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_113 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3532

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

6HTQ|1|A|G|121
6HTQ|1|A|G|122
6HTQ|1|A|G|123
6HTQ|1|A|A|124
6HTQ|1|A|A|125
6HTQ|1|A|A|126
6HTQ|1|A|C|127
6HTQ|1|A|C|128

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L34

Chain T

50S ribosomal protein L23