HL_6HTQ_126

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GCGAAGGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_126 not in the Motif Atlas

Geometric match to HL_3RG5_006

Geometric discrepancy: 0.2934

The information below is about HL_3RG5_006

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_87268.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6HTQ|1|a|G|734
6HTQ|1|a|C|735
6HTQ|1|a|G|736
6HTQ|1|a|A|737
6HTQ|1|a|A|738
6HTQ|1|a|G|739
6HTQ|1|a|G|740
6HTQ|1|a|C|741

Current chains

Chain a

16S rRNA

Nearby chains

Chain o

30S ribosomal protein S15

Chain r

30S ribosomal protein S18