HL_6I7V_037

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

6I7V|1|BA|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_037 not in the Motif Atlas

Homologous match to HL_4LFB_006

Geometric discrepancy: 0.2148

The information below is about HL_4LFB_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_87268.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6I7V|1|BA|G|259
6I7V|1|BA|G|260
6I7V|1|BA|U|261
6I7V|1|BA|A|262
6I7V|1|BA|A|263
6I7V|1|BA|C|264
6I7V|1|BA|G|265
6I7V|1|BA|G|266
6I7V|1|BA|C|267

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BQ

30S ribosomal protein S17

Chain BT

30S ribosomal protein S20