HL_6I7V_144

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6I7V|1|DA|G|386, 6I7V|1|DA|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_144 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0956

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6I7V|1|DA|A|382
6I7V|1|DA|C|383
6I7V|1|DA|A|384
6I7V|1|DA|C|385
6I7V|1|DA|G|386
6I7V|1|DA|U|387
6I7V|1|DA|G|388
6I7V|1|DA|G|389
6I7V|1|DA|U|390
6I7V|1|DA|A|391
6I7V|1|DA|U|392

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DY

50S ribosomal protein L28