HL_6K0B_008
3D structure
- PDB id
- 6K0B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryo-EM structure of archaeal Ribonuclease P with mature tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GUUCGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6K0B_008 not in the Motif Atlas
- Homologous match to HL_4WT8_217
- Geometric discrepancy: 0.1465
- The information below is about HL_4WT8_217
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.6
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
6K0B|1|V|G|62
6K0B|1|V|U|63
6K0B|1|V|U|64
6K0B|1|V|C|65
6K0B|1|V|G|66
6K0B|1|V|A|67
6K0B|1|V|A|68
6K0B|1|V|U|69
6K0B|1|V|C|70
Current chains
- Chain V
- tRNA
Nearby chains
- Chain F
- Ribonuclease P protein component 1
- Chain H
- Ribonuclease P protein component 4
- Chain Y
- Ribonuclease P; RNase P
Coloring options: