HL_6LKQ_077
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- 6LKQ|1|t|A|1808
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6LKQ_077 not in the Motif Atlas
- Homologous match to HL_5J7L_179
- Geometric discrepancy: 0.1204
- The information below is about HL_5J7L_179
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_04783.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6LKQ|1|t|C|1806
6LKQ|1|t|G|1807
6LKQ|1|t|A|1808
6LKQ|1|t|A|1809
6LKQ|1|t|A|1810
6LKQ|1|t|G|1811
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L2
- Chain f
- 50S ribosomal protein L28
Coloring options: