HL_6LKQ_081
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 6LKQ|1|t|A|2030, 6LKQ|1|t|A|2031, 6LKQ|1|t|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6LKQ_081 not in the Motif Atlas
- Homologous match to HL_7RQB_050
- Geometric discrepancy: 0.1304
- The information below is about HL_7RQB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_90642.6
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6LKQ|1|t|G|2027
6LKQ|1|t|U|2028
6LKQ|1|t|G|2029
6LKQ|1|t|A|2030
6LKQ|1|t|A|2031
6LKQ|1|t|G|2032
6LKQ|1|t|A|2033
6LKQ|1|t|U|2034
6LKQ|1|t|G|2035
6LKQ|1|t|C|2036
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L21
- Chain V
- 50S ribosomal protein L3
- Chain i
- 50S ribosomal protein L32
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