HL_6LKQ_103
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCGCAAGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6LKQ_103 not in the Motif Atlas
- Geometric match to HL_2IL9_007
- Geometric discrepancy: 0.2276
- The information below is about HL_2IL9_007
- Detailed Annotation
- GNRA with near cWW
- Broad Annotation
- GNRA with near cWW
- Motif group
- HL_82182.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
6LKQ|1|s|G|378
6LKQ|1|s|C|379
6LKQ|1|s|G|380
6LKQ|1|s|C|381
6LKQ|1|s|A|382
6LKQ|1|s|A|383
6LKQ|1|s|G|384
6LKQ|1|s|C|385
Current chains
- Chain s
- 16S ribosomal RNA
Nearby chains
- Chain O
- 30S ribosomal protein S16
Coloring options: