HL_6LQQ_008
3D structure
- PDB id
- 6LQQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S small subunit preribosomes in transition states (State B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6LQQ_008 not in the Motif Atlas
- Geometric match to HL_5J7L_179
- Geometric discrepancy: 0.1658
- The information below is about HL_5J7L_179
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_04783.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6LQQ|1|5A|C|360
6LQQ|1|5A|G|361
6LQQ|1|5A|C|362
6LQQ|1|5A|A|363
6LQQ|1|5A|A|364
6LQQ|1|5A|G|365
Current chains
- Chain 5A
- 5' ETS
Nearby chains
- Chain 5C
- U3 small nucleolar RNA-associated protein 7
Coloring options: