HL_6LQU_034
3D structure
- PDB id
- 6LQU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6LQU_034 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.3766
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
6LQU|1|SA|G|1778
6LQU|1|SA|U|1779
6LQU|1|SA|G|1780
6LQU|1|SA|A|1781
6LQU|1|SA|A|1782
6LQU|1|SA|C|1783
Current chains
- Chain SA
- 18S pre-rRNA
Nearby chains
No other chains within 10ÅColoring options: